PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00074g00355.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family MYB_related
Protein Properties Length: 221aa    MW: 25264.5 Da    PI: 6.9952
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00074g00355.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding53.74.8e-171471148
                              TSSS-HHHHHHHHHHHHHTTTT...........-HHHHHHHHTTTS-HHHHHHHHHHHT CS
           Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg...........tWktIartmgkgRtlkqcksrwqkyl 48
                              +g+W++ Ed ll ++++q+G g           +W++Ia +++ gRt++++k++w+++l
  Peaxi162Scf00074g00355.1 14 KGPWSAKEDSLLTNYINQHGEGqwrslpknagnRWSLIAGRLP-GRTDNEIKNYWNTHL 71
                              79*****************************************.************996 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.609.8E-21876IPR009057Homeodomain-like
SuperFamilySSF466891.66E-14879IPR009057Homeodomain-like
PROSITE profilePS5129418.318975IPR017930Myb domain
SMARTSM007171.9E-151373IPR001005SANT/Myb domain
PfamPF002491.7E-141471IPR001005SANT/Myb domain
CDDcd001675.86E-121671No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 221 aa     Download sequence    Send to blast
MGRAPCCVKE GLRKGPWSAK EDSLLTNYIN QHGEGQWRSL PKNAGNRWSL IAGRLPGRTD  60
NEIKNYWNTH LLKKLKSVGI VPKPHKIFSK KASKKGQSIQ VEKTKVYVPK PIRISCGISR  120
NNSFENVTFS TTCSSNSYED VDVEIENNKD GIMNNENEVN FDICDEFLME DWCHFSNKGS  180
LPMNESMVDK VYEEYLLLLS ENCYLQEDQR EHPLTGNVSE L
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009792412.16e-88PREDICTED: transcription factor MYB3-like
SwissprotQ9S9K95e-32MYB3_ARATH; Transcription factor MYB3
TrEMBLA0A0V0HKF81e-86A0A0V0HKF8_SOLCH; Putative transcription factor MYB3-like
STRINGPGSC0003DMT4000316072e-85(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA12242154
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G22640.13e-33myb domain protein 3